PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.97C7E
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 254aa    MW: 28477.6 Da    PI: 6.6757
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.97C7EgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.6e-1368114354
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h+e+ErrRR+riN  +++Lr+++P a      K++Ka+ L ++++++k+L
  Araip.97C7E  68 KNHSEAERRRRARINAHLDTLRTVIPAA-----NKMDKASLLAEVIRHLKEL 114
                  58*************************8.....6****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.85965114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.02E-1367122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-1168114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.1E-1469139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-1271120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.33E-478117No hitNo description
PROSITE profilePS516719.063151236IPR002912ACT domain
SuperFamilySSF550211.65E-5153230No hitNo description
Gene3DG3DSA:3.30.70.2605.2E-6153196No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
EIPFCLVWFW DMEMEGFAAS SERSSGVGGG YASSSSLVLD RVKGELVEAP VKLERKGVFP  60
ERTIEALKNH SEAERRRRAR INAHLDTLRT VIPAANKMDK ASLLAEVIRH LKELKTKAAQ  120
ACQGLMIPKD NDELRVEEQE GGLNGFPYSI RASLCCEYKP GLLSDIRQAL DALHLMIISA  180
EIATLGGRMK NVFVIISCEE QSFEDAEYRQ FLAGSVHQAL RSVLDRFSVS QDILESRKRR  240
RISIFSSSSL EDFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236240RKRRR
2237241KRRRI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.97C7E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182686.11e-174transcription factor bHLH30
RefseqXP_025631925.11e-174transcription factor bHLH30
TrEMBLA0A445BXN20.0A0A445BXN2_ARAHY; Uncharacterized protein
STRINGGLYMA12G14400.11e-134(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106852538
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-30bHLH family protein