PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.993UZ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 197aa    MW: 20953.6 Da    PI: 10.3084
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.993UZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-201565256
          AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+eeAa a++ a+++l+g+
  Araip.993UZ 15 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARSLRGA 65
                 69*******.**********883....5*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-311572IPR001471AP2/ERF domain
SMARTSM003803.5E-351578IPR001471AP2/ERF domain
CDDcd000185.73E-281574No hitNo description
PfamPF008473.8E-131564IPR001471AP2/ERF domain
PROSITE profilePS5103222.7211572IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-221572IPR016177DNA-binding domain
PRINTSPR003676.0E-111627IPR001471AP2/ERF domain
PRINTSPR003676.0E-113854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MASSSPSSSA SREGHYRGVR KRPWGRYAAE IRDPWKKTRV WLGTFDTPEE AALAYDGAAR  60
SLRGAKAKTN FPPAPVAAAG GICLDLNVNA PNSDHHRWPS VPVRAGVGGG GIFGEFLHTR  120
VLKDVDLAHQ PHQPPPPHPI HHAAALAAHH HRRGEVTVAV AGGGVEQVAG SGSTASYLGL  180
VRRGIPIDLN EPPPLWL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-211572563ATERF1
3gcc_A3e-211572563ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00645PBMTransfer from LOC_Os05g41760Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.993UZ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182286.11e-140ethylene-responsive transcription factor 12
RefseqXP_025682856.11e-140ethylene-responsive transcription factor 12
TrEMBLA0A444WYQ51e-139A0A444WYQ5_ARAHY; Uncharacterized protein
STRINGAES638777e-75(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-36ERF domain protein 12