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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Araip.9P45Y | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family | bZIP | ||||||||
| Protein Properties | Length: 457aa MW: 51594.4 Da PI: 6.9763 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 50.3 | 5.1e-16 | 51 | 109 | 2 | 60 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
++l+++rr++kNRe+A rsR+RK+a++ eLe v +LeaeN++L +e ++k + +++
Araip.9P45Y 51 ASLQKQRRMIKNRESAARSRERKQAYTLELECLVLQLEAENTRLLEEQAQIKRQRYNHL 109
689*************************************************9988765 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00338 | 1.0E-13 | 50 | 114 | IPR004827 | Basic-leucine zipper domain |
| Pfam | PF00170 | 1.8E-13 | 51 | 106 | IPR004827 | Basic-leucine zipper domain |
| PROSITE profile | PS50217 | 11.013 | 52 | 104 | IPR004827 | Basic-leucine zipper domain |
| CDD | cd14707 | 3.47E-18 | 54 | 103 | No hit | No description |
| SuperFamily | SSF57959 | 4.58E-10 | 54 | 106 | No hit | No description |
| Gene3D | G3DSA:1.20.5.170 | 3.7E-13 | 55 | 105 | No hit | No description |
| PROSITE pattern | PS00036 | 0 | 57 | 72 | IPR004827 | Basic-leucine zipper domain |
| Gene3D | G3DSA:3.30.559.10 | 2.6E-12 | 121 | 207 | IPR023213 | Chloramphenicol acetyltransferase-like domain |
| Pfam | PF02458 | 4.8E-52 | 121 | 446 | IPR003480 | Transferase |
| Gene3D | G3DSA:3.30.559.10 | 5.8E-49 | 234 | 451 | IPR023213 | Chloramphenicol acetyltransferase-like domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| GO:0016747 | Molecular Function | transferase activity, transferring acyl groups other than amino-acyl groups | ||||
| GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 457 aa Download sequence Send to blast |
MASTDPDLPR DSWVCSLAEE AEEEASNNKA MEEFLNNIYS SNDTKSTADK ASLQKQRRMI 60 KNRESAARSR ERKQAYTLEL ECLVLQLEAE NTRLLEEQAQ IKRQRYNHLL HTIIPVIHKR 120 AFFIQSRTQT PLSQILSPPN FDIIQNLLPT THSDSLLLVR FTLFGCGATA ITISLTHKIA 180 DFAALITLLK AWTAACIGGD TQPVVPELAI GSALFPPREI LPAGISGSVN IAAEKFTTRR 240 LIFESSKVEE LKKRVKSELQ FEASRVEVVL GLIWRCALLT TSKRKTPSTL FQAVNLRRRM 300 EPPIPETALG NLVWAFAVTV EEECEVELQV VVKKMRDSLK EFMERKGERL NNSEGRCEVV 360 MEDLKERGEM LKKSGNVVYK CSSWCKVGSS LYEVDFGWGK PLWMCSVNNI VSNTVALMDT 420 RDGHGVEAFV TLDHQHMDSF QQSQELLHYA LLNPPLL |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
| 2bgh_A | 4e-43 | 123 | 437 | 96 | 404 | VINORINE SYNTHASE |
| 2bgh_B | 4e-43 | 123 | 437 | 96 | 404 | VINORINE SYNTHASE |
| Search in ModeBase | ||||||
| Cis-element ? help Back to Top | |
|---|---|
| Source | Link |
| PlantRegMap | Araip.9P45Y |
| Regulation -- PlantRegMap ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Source | Upstream Regulator | Target Gene | ||||
| PlantRegMap | Retrieve | - | ||||
| Annotation -- Protein ? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-value | Description | ||||
| Refseq | XP_016177804.1 | 0.0 | vinorine synthase-like | ||||
| Refseq | XP_025683577.1 | 0.0 | vinorine synthase-like | ||||
| TrEMBL | A0A444WZG3 | 0.0 | A0A444WZG3_ARAHY; Uncharacterized protein | ||||
| STRING | GLYMA15G05450.1 | 1e-143 | (Glycine max) | ||||
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Fabids | OGEF97 | 2 | 2 |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G03970.1 | 2e-20 | G-box binding factor 4 | ||||




