PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.A17BX

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 322aa MW: 37536.4 Da PI: 8.3828

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.A17BX	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.8	1.3e-16	51	135	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfY++YAk +GFs+r+++++++ ++ei+++ +Cs+e k +++ +++t+++ +C a++ ++ k g w ++k++l+H+H+ Araip.A17BX 51 KFYRDYAKAAGFSTRVRSTNRK--ENEIKNQLITCSRERKWKSKIFP---TEKTNPTAGLNCPARIYIHTLKnVGAWIISKVVLHHSHPY 135 6**************98887..7779********9998877...8999**********998879************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.8E-14	51	135	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MDDLTSDCQL NQGEVDFEFE SNEVHEPLCV FDDQFVSKVG MTFTTLEDAG KFYRDYAKAA 60 GFSTRVRSTN RKENEIKNQL ITCSRERKWK SKIFPTEKTN PTAGLNCPAR IYIHTLKNVG 120 AWIISKVVLH HSHPYYPSKA EMLKQHRELS MSIRLCFWLY SAYLYEDHHI WVPIYLDHHF 180 WAGMRRTQRS ESMHSFFNKF ITRNSSLIQF VKQYDNCLGS REQAERESNA ADFHTVIPCT 240 TKSSIEVQFQ DVYTHQKFRE VQAQFRGRAN CITRLTNSAL GYSVYEVGEQ VSSSIFNKFV 300 VTYDSVAAER DIVPSHTKRV KL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.A17BX

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	0.0	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A444YSY6	0.0	A0A444YSY6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	6e-16	far-red elongated hypocotyls 3