PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.A6QWC

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 481aa MW: 54595.8 Da PI: 5.7725

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.A6QWC	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155	3.3e-48	16	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 p+GfrF+Ptdeelv++yL++k+ ++++++ ++i+++d++kvePw++p +kvk+++ ew+fFs rd ky ++kr+nratk gyWkatg+d+ ++++ + Araip.A6QWC 16 PVGFRFKPTDEELVSYYLNHKLLNDNFPI-DIIPDIDLCKVEPWQIPalSKVKSDDPEWFFFSGRDYKYGKSKRSNRATKGGYWKATGQDRFIKERgT 112 89*************************.99***********5448999999**********************************966 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++g kktLvfy+gr p+g+kt+Wv+hey++ Araip.A6QWC 113 MNVIGSKKTLVFYSGRVPNGVKTNWVIHEYHA 144 677*************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.19E-52	14	162	IPR003441	NAC domain
PROSITE profile	PS51005	53.175	15	162	IPR003441	NAC domain
Pfam	PF02365	1.7E-25	16	143	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence Send to blast
MARSATIPFP ILDFIPVGFR FKPTDEELVS YYLNHKLLND NFPIDIIPDI DLCKVEPWQI 60 PALSKVKSDD PEWFFFSGRD YKYGKSKRSN RATKGGYWKA TGQDRFIKER GTMNVIGSKK 120 TLVFYSGRVP NGVKTNWVIH EYHATTFDDS QRNFVLCRLM KKVERKSEDG TDAQACDEGE 180 PSTHMEEADE SVSTMFDSPD VDMDSIFHTL PQDRSSSQHS PVGIEQQESF PFSPSENYYL 240 VNEDSSMHIQ FETNEEKQDA EKFADSILDS GNIAMFEERQ QHHTFMNNHL RSVPSMRVCY 300 ESSDTDAEVV SRRADSREYH VSKMVQSSHS AARTDKTRSI SSEDFWGVDS SSCDSNADKP 360 FEINSIEISS PPPALSGSKN QYNPRLSQTH RKVSSNAIPN LEDKKKLTTV EQSRRDQEKA 420 RKTSPGKKLE TRSSDVNRIG SFIHLEPCSS SESLTPRAVY LVNVVIGILL LLAISWDVLS 480 C

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence Send to blast

MARSATIPFP ILDFIPVGFR FKPTDEELVS YYLNHKLLND NFPIDIIPDI DLCKVEPWQI  60
PALSKVKSDD PEWFFFSGRD YKYGKSKRSN RATKGGYWKA TGQDRFIKER GTMNVIGSKK  120
TLVFYSGRVP NGVKTNWVIH EYHATTFDDS QRNFVLCRLM KKVERKSEDG TDAQACDEGE  180
PSTHMEEADE SVSTMFDSPD VDMDSIFHTL PQDRSSSQHS PVGIEQQESF PFSPSENYYL  240
VNEDSSMHIQ FETNEEKQDA EKFADSILDS GNIAMFEERQ QHHTFMNNHL RSVPSMRVCY  300
ESSDTDAEVV SRRADSREYH VSKMVQSSHS AARTDKTRSI SSEDFWGVDS SSCDSNADKP  360
FEINSIEISS PPPALSGSKN QYNPRLSQTH RKVSSNAIPN LEDKKKLTTV EQSRRDQEKA  420
RKTSPGKKLE TRSSDVNRIG SFIHLEPCSS SESLTPRAVY LVNVVIGILL LLAISWDVLS  480
C

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-37	15	162	17	165	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-37	15	162	17	165	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-37	15	162	17	165	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-37	15	162	17	165	NO APICAL MERISTEM PROTEIN
3swm_A	2e-37	15	162	20	168	NAC domain-containing protein 19
3swm_B	2e-37	15	162	20	168	NAC domain-containing protein 19
3swm_C	2e-37	15	162	20	168	NAC domain-containing protein 19
3swm_D	2e-37	15	162	20	168	NAC domain-containing protein 19
3swp_A	2e-37	15	162	20	168	NAC domain-containing protein 19
3swp_B	2e-37	15	162	20	168	NAC domain-containing protein 19
3swp_C	2e-37	15	162	20	168	NAC domain-containing protein 19
3swp_D	2e-37	15	162	20	168	NAC domain-containing protein 19
4dul_A	2e-37	15	162	17	165	NAC domain-containing protein 19
4dul_B	2e-37	15	162	17	165	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.A6QWC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016182631.1	0.0	NAC domain-containing protein 62-like isoform X1
Refseq	XP_025631880.1	0.0	NAC domain-containing protein 62 isoform X1
TrEMBL	A0A445ACS6	0.0	A0A445ACS6_ARAHY; Uncharacterized protein
STRING	GLYMA07G05351.1	1e-140	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2065	25	86

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	2e-49	NAC transcription factor-like 9