PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.A7ITA
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 159aa    MW: 18439.5 Da    PI: 9.8111
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.A7ITAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.31.7e-151197191
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 kfY++Y+k +GFs++++++++    ++i+++  vC +eg+ +++      + +t+++   +C  ++ v+ +k  + w + k++l+H+H+++p
  Araip.A7ITA 11 KFYKNYSKLAGFSTKIRNTTRD--GDKIKNQLIVCIREGRWKSKIYP---TLKTNPSAGLNCPTRIYVHIMKdVSLWTIFKVVLNHSHPCCP 97
                 6****************98776..8889************9998877...999******************9899**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-121197IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MIFKTLEEAG KFYKNYSKLA GFSTKIRNTT RDGDKIKNQL IVCIREGRWK SKIYPTLKTN  60
PSAGLNCPTR IYVHIMKDVS LWTIFKVVLN HSHPCCPDQA EMLKQHKELS MFFGLFCKAV  120
RGSVYMDFSL LGSPLLSRDE KHTKEVEHAF IFQQVHHTE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.A7ITA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172294.13e-69protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445ABS91e-116A0A445ABS9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.21e-08FAR1-related sequence 4