PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.A7YM7
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 312aa    MW: 35848.6 Da    PI: 4.7815
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.A7YM7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.36.7e-15101171171
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkke 71 
                  +fY +Y+k+  Fs rksk+ k+  +gei+++ fvC ++g+r e+  + +++++++r etrtgC+a++ +k  
  Araip.A7YM7 101 DFYMKYSKSKSFSARKSKTFKN-SSGEIYRQMFVCHRQGFRMEKYYTmEKRKKEPRLETRTGCEARMDIKSA 171
                  6*****************9998.8899****************998856777789**************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.9E-12101171IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MSVVFTDTEM NEQYREDDDF NQQEELVSHQ DMMDEQNEFE QDFRDEYTEG AFFSESDMSD  60
YIVQAAYAVD SVQDIPSLKF SQNFAEEIGK YHFSTLQLAF DFYMKYSKSK SFSARKSKTF  120
KNSSGEIYRQ MFVCHRQGFR MEKYYTMEKR KKEPRLETRT GCEARMDIKS ALNDPSRFTR  180
DAVVISRQSA LVEFSKQLAA IAAKVPERYE ETRDLIMGLF SSYKAADEGD NQPHSGVARS  240
SNPYVHPTTG GSGQPSKKKK RQHCSVCQME GHKKTTCPWQ KDIDNNVIEN EAIGSDDGEM  300
CTEATAELDS DS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.A7YM7
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016163980.11e-113protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025667442.11e-113protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445EH921e-121A0A445EH92_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2352322