PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.A85FN
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 347aa    MW: 38963.3 Da    PI: 10.2314
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.A85FNgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.35.8e-1951137191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r+++++++   +ei+++  +Cs+egk +++ +    +++t+++   +C+a++ ++  k  g w ++k++l+H+H+++p
  Araip.A85FN  51 KFYRNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNSTADLNCHARIYIHTLKdVGAWIISKVVLDHSHPCCP 137
                  6****************98887..8889*************999877...8899999***********998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.8E-1651137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MDDSTSDYQL NPGEVDYEFG SNEVPEPLSV VDDQLVPKVG MTFTTLEDAG KFYRNYAKAA  60
GFSTRVRSTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN STADLNCHAR IYIHTLKDVG  120
AWIISKVVLD HSHPCCPSKA KMLKQHRELS MSIRRTIENN EEAGMRSTQR SESMQIHFLT  180
SLSPGTARLF SSSNNTIIAL EAGSKQRENQ MLQIFIRSYR VQPNPPLKLS FKMRTLIKIT  240
AEMESLKAKR KGTSSLSHED ANLESVNELQ SPPRIQTRGR PKNRLGSKLE KQIANATKKK  300
KTKVLSEEKI NLFDAASVVH SNSSQYQGHV MNYQFRVPAA GDNSLGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.A85FN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020982377.11e-118protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444XQ791e-134A0A444XQ79_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-12FAR1 family protein