PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.A8VCA
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 247aa    MW: 27394.8 Da    PI: 9.8623
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.A8VCAgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.81.7e-2088137255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g
  Araip.A8VCA  88 RYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRG 137
                  8********.**********32....25*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.65E-1687146No hitNo description
SuperFamilySSF541717.85E-2288145IPR016177DNA-binding domain
SMARTSM003805.3E-3388151IPR001471AP2/ERF domain
PfamPF008472.3E-1488137IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-2988145IPR001471AP2/ERF domain
PROSITE profilePS5103223.10388145IPR001471AP2/ERF domain
PRINTSPR003679.3E-1189100IPR001471AP2/ERF domain
PRINTSPR003679.3E-11111127IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MATFLPKPAP SESPQWLLHV NMDPQSITRF FSSETQNPPQ TRNHEKTLEG IAAIVGEHVL  60
FGTKNDSNPT HHKMMEHNKT ENGPVTKRYR GVRKRPWGRW SAEIRDRIGR CRHWLGTFDT  120
AEEAARAYDA AARRLRGSKA RTNFEIPSVL PVSASSSSSS SSGGIRKRKG ARGGDRKCSV  180
VTSVAQLFSS GVPDALELKL GVRSENGSIA ADDVIYGSVG YNQYYYSIEQ CMHAIGMNTI  240
EYVIHVC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-1787146161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A1e-16881441471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.A8VCA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172247.11e-163ethylene-responsive transcription factor ERF084
SwissprotQ9M8M56e-29ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLA0A2P5X4785e-52A0A2P5X478_GOSBA; Uncharacterized protein
STRINGXP_004305488.11e-51(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130232631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.13e-30ERF family protein