PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AD1AX
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 413aa    MW: 47861.2 Da    PI: 10.036
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AD1AXgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.11e-11127189164
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCka 64 
                  +f+++Y++++GF+vr+ + +k k ++++ + ++ C k+g+r+++k++ + ++++ra+trt+C+ 
  Araip.AD1AX 127 DFWKNYGRMMGFDVRQLYANKCKVDNSVSNFRLICAKKGQRRPDKRD-NLTKQPRAKTRTSCQL 189
                  69*******************************************99.99************84 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.0E-8127188IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MVVTEMMELP SETNMWVPSM ETTMIVSPME TSFVLSPTRE TTIGLHSKSN MEVLLPETKT  60
VNLLEETNEL MITMIPPWKD CRLIYQNMEN TQIAQHNSTL ITFSRPIIAK KIPKLSMEFD  120
TVLEAKDFWK NYGRMMGFDV RQLYANKCKV DNSVSNFRLI CAKKGQRRPD KRDNLTKQPR  180
AKTRTSCQLN HNHILQISKT SHMMPSQRKI WHGIRLKETH ELTSLQAGGK DVLGYTKQDQ  240
KNYLRSKRKR DLAYGEAVSI SRGMGCIASK IQVEDHPWLK SIYKVKEKWA HCYMKKAYTI  300
GMRSTQLSES FNSDLKDFMR SSLDIIHFLK QFERVVGGKR YKELQAEYNA RQKLSRLKDD  360
SLAIVKTKEA REMIVHDSEK KVVQSDTRVD ATSRHNQDDD VSNILNAKEI VNS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.AD1AX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016178496.11e-114protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025685391.11e-114protein FAR1-RELATED SEQUENCE 5-like
TrEMBLB8B4I75e-74B8B4I7_ORYSI; Uncharacterized protein
TrEMBLB9FSI25e-74B9FSI2_ORYSJ; Uncharacterized protein
STRINGXP_004305434.18e-43(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30451449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-09FAR1-related sequence 5