PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AKR06
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 237aa    MW: 25400.1 Da    PI: 9.8581
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AKR06genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-202473255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+tae+Aa+a++aa+++++g
  Araip.AKR06 24 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEDAARAYDAAAREFRG 73
                 69*******.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.29E-222482IPR016177DNA-binding domain
SMARTSM003804.9E-402487IPR001471AP2/ERF domain
PfamPF008471.5E-132473IPR001471AP2/ERF domain
PROSITE profilePS5103223.8282481IPR001471AP2/ERF domain
CDDcd000181.61E-172481No hitNo description
Gene3DG3DSA:3.30.730.101.9E-322481IPR001471AP2/ERF domain
PRINTSPR003678.9E-112536IPR001471AP2/ERF domain
PRINTSPR003678.9E-114763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MAPRDKTAAV KVNGKGSAGV KEVHFRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEDA  60
ARAYDAAARE FRGPKAKTNF PFPDSDDNNN NNIVVVKNNN RSPSQSSTVE SSSRDRDSYS  120
AAATAAADSS PLDLNLAPAG AGFSGSIRFP FQQPFAVFPC RMPAAKQALY LDAVLRAGMV  180
GHGQFGFGYN RPAAAGAQSD SDSSSVIDLN QHDRDVAKNN GRGLVLDLNE PPPQEMA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-212182264ATERF1
3gcc_A3e-212182264ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.AKR06
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankSHU918570.0U91857.1 Stylosanthes hamata ethylene-responsive element binding protein homolog gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181103.11e-173ethylene-responsive transcription factor 4
RefseqXP_025681697.11e-173ethylene-responsive transcription factor 4
TrEMBLA0A444WYI81e-172A0A444WYI8_ARAHY; Uncharacterized protein
STRINGXP_007148134.14e-74(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-27erf domain protein 9