PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AKW6F
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 238aa    MW: 25759.8 Da    PI: 5.9042
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AKW6FgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.3e-11149196455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Araip.AKW6F 149 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 196
                  8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.85E-11143200No hitNo description
SuperFamilySSF474597.2E-18143213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-18145214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-8149196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10151201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MDPGAMMNEG SFGNGGGNTV PFSLAEIWPF PQAVNAAGGG ALGLRRPQFG LGQFGDFIAG  60
PNREPGPVAS EQKAASGGGG GGSRKRRESE EESPKGVSTS NVAPNAVEEE ERQASSGKPA  120
DQNNQTPPPD PPRQDYIHVR ARRGQATDSH SLAERARREK ISERMKILQD LVPGCNKVIG  180
KALVLDEIIN YIQSLQRQVE FLSMKLEAVN SRLNTGIEAF PPKDVSLQRF LYWDVEFC
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.AKW6F
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025638939.11e-147transcription factor BHLH089
SwissprotQ0JXE71e-73BPE_ARATH; Transcription factor BPE
TrEMBLA0A445DP821e-146A0A445DP82_ARAHY; Uncharacterized protein
STRINGXP_007153872.11e-101(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.16e-65BIG PETAL P
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]