PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AR7FU
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 312aa    MW: 35375.2 Da    PI: 5.2393
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AR7FUgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY901.9e-2879139158
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                  ++Dg++WrKYGqK++ g++fpr+Y+rCt++   gC ++k+v++s+edp+v+eitY+g+H++
  Araip.AR7FU  79 MEDGHSWRKYGQKDILGAKFPRGYFRCTHRhvqGCLATKQVQKSDEDPNVLEITYKGRHTC 139
                  58***************************99999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-2775140IPR003657WRKY domain
SuperFamilySSF1182903.66E-2478139IPR003657WRKY domain
PROSITE profilePS5081120.62179137IPR003657WRKY domain
SMARTSM007742.3E-4079141IPR003657WRKY domain
PfamPF031062.9E-2680139IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MEQILSTYEK ALTMLNNTNF MKDSSHCSSS SLANGSTKSE VLDKEDVAKH KQVSKKRKTM  60
SMWTKQVRVC LGTELDGSME DGHSWRKYGQ KDILGAKFPR GYFRCTHRHV QGCLATKQVQ  120
KSDEDPNVLE ITYKGRHTCI QVSHHSKKPT ISKPNMALLL EEQTKNHQPT QKEMKTEQPH  180
ETILTFGTSQ ELEVKLDDFD FDFDPDTKEN IFSSLCFTSP SIVSENDEDN NKMFSYIESF  240
SPEFISPTTN SESNNIFHFN DGLGLCVQTS DSDFSDNVSA PTSSVSNSSI EGLDFHSFDE  300
KVDFDNYYSI NS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B9e-20811371874Disease resistance protein RRS1
5w3x_D9e-20811371874Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.AR7FU
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181228.10.0probable WRKY transcription factor 46
RefseqXP_025631667.10.0probable WRKY transcription factor 46
TrEMBLA0A445AC120.0A0A445AC12_ARAHY; Uncharacterized protein
STRINGGLYMA16G02960.12e-96(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.15e-41WRKY DNA-binding protein 30