PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ART9V
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 415aa    MW: 47823.6 Da    PI: 9.3133
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ART9VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.96.8e-1876162191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Araip.ART9V  76 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 162
                  6***************998776..8889*************998877...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.2E-1576162IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MDHSTSDCQL NPGEVDYEFE SNKVLEKCGC IYTLLVYYIR HDWFLTRRIV QPLSVVDDEL  60
VPKVGMTFTT LEDAGKFYRN YAKAAGFSTR VRCTNRKGNE IKNQLITCSR EGKWKSKISP  120
TEKTNPTAGL NCPARIYIHT LKDVGAWIIS KVVLDHSHPC CPSKAEMLKQ HRELSMSIRR  180
TIENNEEADR HIWVPINLDH HFWIGMRSTQ RSESMYSFFN KYITRNSSLI QFVKQYDNCL  240
GSREQAERES DAADFHTVIP CATKSSIEAQ FQDAYTHAKF REVQAQFGGK ANCITRLKNS  300
ALGYSVYEVG EQVSSSIFNK FVVTYTQLQP RGILCRHALS VLSFEQVSQV SPRYILKRWS  360
KKVKRRHTHI KSSHDEPLME PRSKRFDQLV FSFAKYLRIC IRIGGADCNS APCVR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ART9V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992780.11e-127protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBLA0A444X8170.0A0A444X817_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-23FAR1 family protein