PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AXK3N
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 530aa    MW: 58862.1 Da    PI: 6.8836
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AXK3NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.65.3e-12235291155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV++++++gr++A+++d  + ++  ++ k  + g ++ +e+Aa+a++ a++k++g
  Araip.AXK3N 235 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 291
                  78*******************433.44555535555.779999**************98 PP
2AP228.92.9e-093233621355
          AP2  13 grWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   rW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Araip.AXK3N 323 RRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 362
                  589999877522...5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-9235291IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-15235301IPR016177DNA-binding domain
CDDcd000181.03E-18235301No hitNo description
SMARTSM003804.8E-23236305IPR001471AP2/ERF domain
PROSITE profilePS5103217.332236299IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-12236300IPR001471AP2/ERF domain
PRINTSPR003671.1E-6237248IPR001471AP2/ERF domain
PROSITE profilePS5103215.119309370IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-13322372IPR016177DNA-binding domain
PfamPF008473.4E-4323362IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.0E-14323370IPR001471AP2/ERF domain
CDDcd000182.55E-19324372No hitNo description
SMARTSM003803.9E-21324376IPR001471AP2/ERF domain
PRINTSPR003671.1E-6352372IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MSNWLGFSLT PHLRIDEEFE RQNEERGNGG SYPPPVMPLR SDGSLCVADS FSRSAAPHGC  60
YSNPSPLAET KAFCQQNRNQ NQQNNFSKIN MNVETSSSLF QSFNPYNDSR SNHNHHHHHH  120
HALIAGNGVY KSSWLAQTCC SSSSSAEANQ NSSNNNNNNG ECNFQSLSLT MSPSSVQQQQ  180
QNGGVVVVSG MNHQVVLHNQ HNQVDDDTRK RSIAKSQGRE PVPRKSIDTF GQRTSQYRGV  240
TRHRWTGRYE AHLWDNSCRK EGQTRKGRQG GYDKEEKAAR AYDLAALKYW GPTTHINFPL  300
STYEKELEEM KHMNRQEFVA NLRRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF  360
RGTSAVTNFD ISRYDVKRIC SSSTLIAGDL AKRSPKDSAL ATAEDFNSSG SAATPSQPTP  420
LAITDGEQHS DELSNMVWNG NSDEQPQNES GTSNSNVAGP LSQQVSPSNK NEANPPQSPN  480
EFGVSGTDYG HGYFTLHGPP KYDDGNNENE HRIGNLGLVN QVPMFALWNE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.AXK3N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-37AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025618400.10.0AP2-like ethylene-responsive transcription factor AIL1
TrEMBLA0A445BMP70.0A0A445BMP7_ARAHY; Uncharacterized protein
STRINGGLYMA16G00950.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102743137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-104AP2 family protein