PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.AXW4Y
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 106aa    MW: 12002.9 Da    PI: 10.5023
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.AXW4YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.61.8e-171794182
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle 82
                 kfYn+YA++vGF+ r+++skk+ ++g ++   +vC++eg+++++ ++   +r+t ++  tgCka++  + +  g w v  + 
  Araip.AXW4Y 17 KFYNTYARRVGFDRRNRSSKKN-TDGVVYYVMLVCNQEGRAKSKVDE---TRKTYPKGPTGCKARMIASSDVGGSWIVRGVA 94
                 6************999998887.9999*************9998777...999************************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.2E-141793IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    Send to blast
MLLPLSIEFE SLDAVIKFYN TYARRVGFDR RNRSSKKNTD GVVYYVMLVC NQEGRAKSKV  60
DETRKTYPKG PTGCKARMIA SSDVGGSWIV RGVAKLILKP AFEHNR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.AXW4Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016173326.13e-58protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444XQE98e-57A0A444XQE9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.14e-11FAR1 family protein