PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BE6W6
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 197aa    MW: 21898.9 Da    PI: 10.3006
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BE6W6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.6e-054061223
                 EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                 +C+ C+k Fs++  L  H++ H
  Araip.BE6W6 40 QCKFCNKKFSNSQALGGHQNAH 61
                 8******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.28E-63666No hitNo description
Gene3DG3DSA:3.30.160.603.0E-43864IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.0743966IPR007087Zinc finger, C2H2
PROSITE patternPS0002804161IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MVPSPDNTSS HGRDCGKLLA PSSNSCKLLK KYPQNKRRLQ CKFCNKKFSN SQALGGHQNA  60
HKLERAAVKR DNILAMASAY SNYLPPFQSN MQNYYSNFSA FSHSSRTLGM QQPQAMIHNR  120
SSTALGPGYL HNILLGNQIM DLQCSRQKEI LTVNLLPQQS PLSLGENMNP NQTNKQQQQP  180
GAGNNKPQGE IDLTLKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BE6W6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172365.11e-143zinc finger protein ZAT11-like
RefseqXP_025677956.11e-143zinc finger protein ZAT11-like
TrEMBLA0A444XCY21e-142A0A444XCY2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1669724
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24625.12e-11zinc finger protein 7