PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BH62W
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 229aa    MW: 25972.4 Da    PI: 9.2328
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BH62WgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.51.2e-22133193259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  dD  +WrKYG Ke+++s+fprsY+rC+ +   +C++ k+v+r++e+p + +itY g H ++
  Araip.BH62W 133 DDNNAWRKYGEKEIQNSKFPRSYFRCSRKydqNCRAIKHVQRTQENPCMYQITYIGMHSCK 193
                  8999***********************98889**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.2E-22122193IPR003657WRKY domain
PROSITE profilePS5081118.762127195IPR003657WRKY domain
SuperFamilySSF1182901.96E-21129194IPR003657WRKY domain
SMARTSM007743.3E-29132194IPR003657WRKY domain
PfamPF031067.4E-21133193IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0031347Biological Processregulation of defense response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MKKNTLCSEN NDVSWKKKRR IIKELVQGQE AATQLKLLLQ NPIGDTSLSA EELLGNVLTS  60
FAETLSLLAS NHSQEQPCRH DPSPSSADPS DDYSGESHNM KRSNLTPAKK VGRGCYKRRR  120
TEHTWTTISP TADDNNAWRK YGEKEIQNSK FPRSYFRCSR KYDQNCRAIK HVQRTQENPC  180
MYQITYIGMH SCKATPNDAP TINQDTTPPP PPPPPPPPXX XXXXXXXXX
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-22126193269OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11519KKKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BH62W
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020963422.11e-162probable WRKY transcription factor 70
TrEMBLA0A444YA351e-158A0A444YA35_ARAHY; Uncharacterized protein
STRINGGLYMA06G14720.18e-61(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-36WRKY DNA-binding protein 70