PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.BKN8B

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 134aa MW: 15316.1 Da PI: 10.1631

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.BKN8B	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.1	4.4e-11	14	84	19	91
FAR1 19 skkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +++skr ++i+++ vCs+eg+ +++ + +t+++ +C a++ v+ +k g w + k+ l+H+H+++p Araip.BKN8B 14 KHYSKRADKIKNQLIVCSREGRWKSKISP---ILKTNPSAGLNCPARIYVHIMKdVGLWTIFKVILNHSHPCCP 84 456778888***********9998776...99***************999*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.9E-8	15	84	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence Send to blast
MIFKTLEEAG KFYKHYSKRA DKIKNQLIVC SREGRWKSKI SPILKTNPSA GLNCPARIYV 60 HIMKDVGLWT IFKVILNHSH PCCPDQAEML KQHKELSIMH CFRFTRPYGF GLVCRAVRGS 120 SYMDSGLLGS PLLS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.BKN8B

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016206076.1	1e-55	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445ABS9	2e-68	A0A445ABS9_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	3e-06	FAR1-related sequence 4