PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.BR161
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 195aa    MW: 22313.8 Da    PI: 4.7856
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.BR161genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.86.1e-12891433890
         FAR1  38 egkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +g+r+ ++ + ++++  +r++tr+gC+a++kv+ ++ +g+w+v+ ++ eHnHe+ 
  Araip.BR161  89 YGERDAKHVHrNDRKMDPRPVTRCGCNARIKVHVDSrNGRWYVEFFSDEHNHEML 143
                  45555444443577888******************99***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.0E-1087143IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MEGTEEVSSN FQENVTPGVD EDPIENETFV AETESVPIGA SHSDDQRDVI VLDGIGSFGT  60
IDFDALRAEE IMMIEFVDLK TAYDFYNEYG ERDAKHVHRN DRKMDPRPVT RCGCNARIKV  120
HVDSRNGRWY VEFFSDEHNH EMLEARFRGM MRSHRAIKTG DLHQINTMRS SGLRVPTIFR  180
AFANQSGGFE MVGFQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.BR161
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702767.11e-123protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445A1871e-125A0A445A187_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-12FAR1-related sequence 5