PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.BXX66

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 182aa MW: 20622.9 Da PI: 6.5157

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.BXX66	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.3	8.6e-29	105	154	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtp+LH +Fv+av++LGG+e+AtPk +l+lm+v gL+++hvkSHLQ Araip.BXX66 105 PRLRWTPDLHLAFVQAVNRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQ 154 8************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.8E-26	101	154	IPR009057	Homeodomain-like
SuperFamily	SSF46689	6.45E-13	103	155	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.7E-20	105	154	IPR006447	Myb domain, plants
Pfam	PF00249	3.2E-8	106	154	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence Send to blast
MGERIIEGKE GSCSLITSPN NGSRKRSFID LNEEAGDHEN RSNNNDNEIC SSSWQEGNLS 60 SSNNNNNTTS SSEEEEEEDE GGNNNKNNKG RTTSMVRQYV RSKMPRLRWT PDLHLAFVQA 120 VNRLGGQERA TPKLVLQLMN VRGLSIAHVK SHLQASSYIY IYLILFGCLD ILFIYFFIKL 180 NF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	4e-20	106	154	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	4e-20	106	154	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	4e-20	106	154	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	4e-20	106	154	3	51	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.BXX66

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016169468.2	1e-106	two-component response regulator ORR24
Refseq	XP_020964558.1	1e-106	two-component response regulator ORR24
Refseq	XP_025674172.1	1e-106	two-component response regulator ORR24 isoform X1
Refseq	XP_025674173.1	1e-107	putative uncharacterized protein DDB_G0286901 isoform X2
TrEMBL	A0A444Y5T7	1e-100	A0A444Y5T7_ARAHY; Uncharacterized protein
STRING	XP_004487568.1	2e-40	(Cicer arietinum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3012	32	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	8e-31	G2-like family protein