PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.C0155

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 139aa MW: 15755 Da PI: 7.8883

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.C0155	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.5	3.2e-11	50	113	1	69
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69 kfY++Y+k +GFs+++++++++ ++ei+++ vCs+eg+ +++ + + +t++ ++C a++ v Araip.C0155 50 KFYKNYSKLAGFSTKIRNMTQK--EDEIKNQLIVCSREGRWKSKISP---TLKTNPLAGINCPARIYVY 113 6**************98877..788*********9998776...999**********9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.3E-8	50	113	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence Send to blast
MNDSTLNQLN ESDLDYSSES YQAEETRCVV DEQFVPKIGM TLKTLEEAGK FYKNYSKLAG 60 FSTKIRNMTQ KEDEIKNQLI VCSREGRWKS KISPTLKTNP LAGINCPARI YVYILKDVSL 120 CSESFTPLLS KLGKDAQII

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.C0155

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016172294.1	9e-65	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YB77	4e-79	A0A444YB77_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477