PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.C0KRF
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 164aa    MW: 19490.3 Da    PI: 10.2309
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.C0KRFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.41.7e-2170160190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr.traetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY+++++  GF ++k  + k    g+ ++r+f C++eg r++++ +++++rr +++etrt+C+a++ + +++ ++ w+v+k+ ++HnH+l+
  Araip.C0KRF  70 DFYQKFGRFHGFGICKGDMFKD-GGGNLIRRRFFCNREGLRHRKHYNRVDRRRpHKPETRTNCEARMCIYLDRsNNIWRVKKVITKHNHALT 160
                  6*****************9998.8888****************99996555553789**************999****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.3E-1970160IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MELKRSRKLV MRCFRSTEVA STLDPKMVTV NLEDVLYTRN DDGVNYGDVA SLTDDDILRK  60
VFRTEEDAYD FYQKFGRFHG FGICKGDMFK DGGGNLIRRR FFCNREGLRH RKHYNRVDRR  120
RPHKPETRTN CEARMCIYLD RSNNIWRVKK VITKHNHALT HPGM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.C0KRF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207062.15e-99protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025627943.15e-99protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445AQD42e-97A0A445AQD4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15343210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-10FAR1 family protein