PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.C575S

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bHLH

Protein Properties

Length: 114aa MW: 12944 Da PI: 7.9548

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.C575S	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.8	1.5e-06	1	28	4	31
HHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 4 ahnerErrRRdriNsafeeLrellPkas 31 +h e E++RR+++ + ++Lr+llP + Araip.C575S 1 MHRETEKQRRQEMGKLCATLRSLLPLEY 28 599**********************863 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	4.7E-4	2	26	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.38E-5	2	27	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 114 aa Download sequence Send to blast
MHRETEKQRR QEMGKLCATL RSLLPLEYIK KCLCPLSRLL HILIGEGLNI INTISTKKNG 60 RFIHTIQSED PNISSSADYS ELQRKLTEAI ISSSSSLPET LIRPDESCLL YLDS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.C575S

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020958846.1	4e-53	transcription factor bHLH36-like
Refseq	XP_025656694.1	4e-53	transcription factor bHLH36
TrEMBL	A0A444YYB1	9e-52	A0A444YYB1_ARAHY; Uncharacterized protein
STRING	XP_008437723.1	3e-19	(Cucumis melo)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	3e-10	bHLH family protein