PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.CC9VW

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 96aa MW: 11178.5 Da PI: 9.1251

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.CC9VW	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	29.9	1.8e-09	50	91	1	44
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44 kfY++Y k vGFs+++++++++ +ei+++ fvCs+eg+ +++ Araip.CC9VW 50 KFYKNYFKLVGFSTKIRNTNRK--GDEIKNQLFVCSREGRWKSK 91 6**************98877..899**********98776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.0E-6	50	91	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 96 aa Download sequence Send to blast
MNNSTSNQLN ESDLDYSSES YQADESRCVV DEQFVPKVGM TFKTLEKDGK FYKNYFKLVG 60 FSTKIRNTNR KGDEIKNQLF VCSREGRWKS KISQTL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.CC9VW

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016172294.1	3e-47	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YB77	3e-49	A0A444YB77_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477