PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.CL31Z
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 313aa    MW: 35292.8 Da    PI: 6.0403
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.CL31ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.33.8e-3480137260
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers  d++++ei+Y+g+Hnh+k
  Araip.CL31Z  80 DDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGTHNHPK 137
                  8****************************************.***************85 PP
2WRKY34.83.4e-11255276122
                  ---SS-EEEEEEE--TT-SS-E CS
         WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                  ldDgy+WrKYGqK+vkg+++p 
  Araip.CL31Z 255 LDDGYRWRKYGQKVVKGNPNPS 276
                  59******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-2969138IPR003657WRKY domain
SuperFamilySSF1182904.97E-2678138IPR003657WRKY domain
SMARTSM007749.1E-3779137IPR003657WRKY domain
PfamPF031064.2E-2680136IPR003657WRKY domain
PROSITE profilePS5081123.77880138IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-13240281IPR003657WRKY domain
SuperFamilySSF1182902.48E-10247300IPR003657WRKY domain
PROSITE profilePS5081115.526250313IPR003657WRKY domain
SMARTSM007741.5E-5255303IPR003657WRKY domain
PfamPF031066.2E-7256281IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MNKLAYVSLF SASCFSQSSC SLNGFLVLLS NNPKESLICL LQLLHHFQAQ DLLLQTEVDF  60
LNSSNNNYQP QSQTLSRRSD DGYNWRKYGQ KQVKGSENPR SYYKCTFPNC PTKKKVERSL  120
DGQITEIVYK GTHNHPKPQN TRRNSSSSSN STAFAIAPSN QMNNSEVTDH QSYTHGSGQM  180
DSIATLENSS ISVGDDDFEQ SSQRCKSSGD DYDDDEPDAK RWKIEGENEG ISGGGSRTVR  240
EPRVVVQTTS DIDILDDGYR WRKYGQKVVK GNPNPSLTQL CHHLDYETDL EDVKYWSWHN  300
EVVGVWVLGC SSM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-1771138674WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.CL31Z
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179296.21e-156WRKY transcription factor WRKY24-like, partial
SwissprotQ6IEQ74e-91WRK24_ORYSJ; WRKY transcription factor WRKY24
TrEMBLA0A444X3A41e-177A0A444X3A4_ARAHY; Uncharacterized protein
STRINGXP_007142085.11e-120(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF107734114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.13e-70WRKY DNA-binding protein 33
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Zhang ZL, et al.
    A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells.
    Plant Mol. Biol., 2009. 70(1-2): p. 139-51
    [PMID:19199048]
  3. Basu S,Roychoudhury A
    Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
    Biomed Res Int, 2014. 2014: p. 706890
    [PMID:25110688]
  4. Zhang L, et al.
    Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells.
    Plant Sci., 2015. 236: p. 214-22
    [PMID:26025535]