PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.D1U93
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 120aa    MW: 13934.3 Da    PI: 10.8611
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.D1U93genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2171.7e-054265123
                 EEETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
                 ++C  Cg+ F +++ L++H +  H
  Araip.D1U93 42 HVCRVCGRKFYTNEKLVNHFKQlH 65
                 79*****************98777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015711.3024270IPR007087Zinc finger, C2H2
PROSITE patternPS0002804465IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MVAYANSHTF TGVPHAVRQW RKEKELYNRL ESKGVIKRNE SHVCRVCGRK FYTNEKLVNH  60
FKQLHESEQM KRVNQIASAR GNRRVKLVAK YSMKMEKYKK TARDILTPRV GCPSVGPCIG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.D1U93
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025632121.14e-72uncharacterized protein LOC112726816
RefseqXP_025632123.14e-72uncharacterized protein LOC112726816
RefseqXP_025632125.14e-72uncharacterized protein LOC112726816
RefseqXP_029146398.14e-72uncharacterized protein LOC112726816
TrEMBLA0A445ADT11e-68A0A445ADT1_ARAHY; Uncharacterized protein
STRINGGLYMA11G36770.32e-53(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75002533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.19e-46C2H2 family protein