PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.D577Y
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 112aa    MW: 12949.6 Da    PI: 9.847
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.D577YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.48.3e-1261104145
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeek 45 
                  +fY +Y++  GF +rksk  k+  +gei+++tfvC+++g+r+++ 
  Araip.D577Y  61 EFYTSYSRLKGFAIRKSKRVKN-AKGEIVSYTFVCNRQGFRHKKW 104
                  6****************99998.8888**************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.6E-961105IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MNNINHEAIS TSTNRESAMP DPENGLLNET DIEPQSAQVP SHVSVEDVLK MEFFTPGEAR  60
EFYTSYSRLK GFAIRKSKRV KNAKGEIVSY TFVCNRQGFR HKKWLDKLDR KR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.D577Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016185197.19e-65putative protein FAR1-RELATED SEQUENCE 10
RefseqXP_025635626.19e-65putative protein FAR1-RELATED SEQUENCE 10
TrEMBLA0A445ADV12e-62A0A445ADV1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.19e-09FAR1-related sequence 12