PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.D5QVM
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 331aa    MW: 37018.6 Da    PI: 8.9837
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.D5QVMgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.57.9e-104586445
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                  k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Araip.D5QVM 45 QKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 86
                 6889*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-83689No hitNo description
SMARTSM003389.2E-842105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3934488IPR004827Basic-leucine zipper domain
PfamPF001706.2E-74686IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.25E-74689No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141443.7E-33128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MADASPRTDI STDVDTDDKN QRSDRGALVP VASDSSDRSK DKTDQKSLRR LAQNREAARK  60
SRLRKKAYVQ QLESSRLKLT QLEQELQRAR QQGIFISSSG DQAHSMSGNG AMQFDAEYAR  120
WLEEQNRQVN ELRAAVNSHA GDTELRMIVD GVMAHYDEIF RLKGIAAKAD VFHLLSGMWK  180
TPAERCFLWL GGFRSSELLK LLVSQLEPLT EQQLLGITNL QESSQQAEDA LSQGMEALQQ  240
SLAETLSTGS QNSSGSSGNV ANYMGQMAMA MGKLGTLEGF IRQADNLRQQ TLQQMHRILT  300
TRQSARALLA IHDYFSRLRA LSSLWLARPR D
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.D5QVM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016170615.10.0transcription factor TGA2.2
RefseqXP_016170616.10.0transcription factor TGA2.2
RefseqXP_020965465.10.0transcription factor TGA2.2
RefseqXP_025673397.10.0transcription factor TGA2.2
RefseqXP_025673398.10.0transcription factor TGA2.2
RefseqXP_025673399.10.0transcription factor TGA2.2
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A445BZX60.0A0A445BZX6_ARAHY; Uncharacterized protein
STRINGXP_007133721.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-158TGACG motif-binding factor 6