PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.D99M2
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 478aa    MW: 54142.1 Da    PI: 9.2378
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.D99M2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.43.7e-1651137191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk + Fs+r+++ +++   + i+++  +Cs+egk +++ +    +++t+++   +C+a++ ++  k  g w ++k++l+H+H+ +p
  Araip.D99M2  51 KFYRNYAKAADFSTRVRSINRK--GNDIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCHARIYIHTLKdVGAWIISKVVLDHSHPYCP 137
                  6****************99887..66699************998877...8999**************998879**************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.9E-1351137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    Send to blast
MDDSTSDCQL NQGEVDYEFE SNEVPEPLSV VDDQFVPKVG MTFTTIEDAG KFYRNYAKAA  60
DFSTRVRSIN RKGNDIKNQL ITCSREGKWK SKISPTEKTN PTAGLNCHAR IYIHTLKDVG  120
AWIISKVVLD HSHPYCPSKA EMLKQHRELS MSIRRTIENN EEAGIRPSKT YQSFVAAAGG  180
HRNSLIQFVK QYDNCLGSRE QAARESDAAD FHTVIPCATK SSIEAQFQDV YTHQKFREVQ  240
AGKANCITRL TNSALGYSVY EVGEQVFSSI FNNFMVTYDS VAAESRGRLC RHALSVLSFE  300
RVSQVSLRYI LERWSKKVKR RHTHIKSSHD EPLLEPRSKR FDQLVFCSQN ICKFASESEE  360
LTAILHHAYD NVMVEMESLK AKRKGTSSLS HEDANLESVN ELQNPPRIRT RGRPKNRLGL  420
KLDKQIANAT KKKKTKALNE LNLFDVASVV HSNSSQYQAR VMNYQFRVPA AADNSLGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.D99M2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020986710.10.0protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBLA0A444Z0B80.0A0A444Z0B8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.22e-13FAR1-related sequence 4