PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.DJ4NG

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 90aa MW: 10463.6 Da PI: 4.6312

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.DJ4NG	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.9	5.6e-07	51	88	1	40
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40 kfY++Y+k +GFs+r+ +++k+ +ei+++ +Cs+e k Araip.DJ4NG 51 KFYKDYSKVAGFSTRVWSTNKK--GNEIKNQLITCSREEK 88 6*************998877..8889******9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 90 aa Download sequence Send to blast
MDDSTSNCQL NQSEVDFKTE SNEVLETFCS VDDQFAPKVW MTFNTLEDAA KFYKDYSKVA 60 GFSTRVWSTN KKGNEIKNQL ITCSREEKWK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.DJ4NG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020958614.1	4e-42	uncharacterized protein LOC110262592
TrEMBL	A0A445C945	1e-59	A0A445C945_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477