PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DLE1Q
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 305aa    MW: 32917.2 Da    PI: 8.0937
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DLE1QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-182372255
          AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g
  Araip.DLE1Q 23 KFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDTAARALRG 72
                 899******.7*********....4456*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.4E-122372IPR001471AP2/ERF domain
SMARTSM003801.2E-362386IPR001471AP2/ERF domain
PROSITE profilePS5103220.5472380IPR001471AP2/ERF domain
CDDcd000183.58E-312380No hitNo description
SuperFamilySSF541713.86E-202381IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.5E-282380IPR001471AP2/ERF domain
PRINTSPR003679.0E-82435IPR001471AP2/ERF domain
PRINTSPR003679.0E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MGAATAVERT RSRKKASSRG HHKFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDTAARAL RGVNARTNFD LPAAESGGAA ASKRGAGSGF IPDCTEPFSF EDSSEAVADG  120
DGLLGALKAK LFDVKGGGGR FPPPVVQSSM VSRSTQNQNQ NQNQNCSVKN KELFSSSVVM  180
LPNKMNNYNN NNNANCSSTC SLPCLISTSS NTCSKSGIMI PANANHDDHE GTFNSSHHHH  240
QQFCQTPSPM TTWSNNEVSY DQLPWTHHQE NGFLASSSTA TLTWPNHLSG VNESNTVDNM  300
GYSAM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-1521791271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.DLE1Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025682987.10.0AP2-like ethylene-responsive transcription factor PLT1
TrEMBLA0A444WX770.0A0A444WX77_ARAHY; Uncharacterized protein
STRINGXP_007148016.11e-84(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18related to AP2 11