PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DX3JC
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 76aa    MW: 8649.96 Da    PI: 9.9285
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DX3JCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.68.4e-083774140
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40
                 kfY++Y+k +GFs+r+++++k+   +ei+++   Cs +gk
  Araip.DX3JC 37 KFYKDYSKATGFSTRVRSTNKK--GNEIKNQLIACSLKGK 74
                 7****************98887..8889*********998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.6E-53774IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MTVSFERILE VTSLCDADEQ FVSKVGMTFK TLEDATKFYK DYSKATGFST RVRSTNKKGN  60
EIKNQLIACS LKGKWK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.DX3JC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020979233.16e-29protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZBI42e-31A0A444ZBI4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477