PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.DY1NU
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 431aa    MW: 49065.4 Da    PI: 8.4778
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.DY1NUgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.81e-1437118590
         FAR1   5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  + Ak +GFs+r+++++++  ++ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++
  Araip.DY1NU  37 SKAKAAGFSTRVRSTNRK--ENEIKNQLITCSREGKWKSKISP---TEKTNPTASLNCPARIYIHTLKdVGAWIISKVVLDHSHPCC 118
                  56999********98887..7779*************998877...8999**************998879**************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.2E-1236118IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MDDSTSDCQL NPGEVDCEFE SNEVPEPLSV VDDQFVSKAK AAGFSTRVRS TNRKENEIKN  60
QLITCSREGK WKSKISPTEK TNPTASLNCP ARIYIHTLKD VGAWIISKVV LDHSHPCCLS  120
KEEMLKQHRE LSMSIRRTIE NNEEAGMRST QRSESIHSFF NKFITRNSSL IQFVKQYDNC  180
LGSREQAERE SDAADFHTVI PCATKSSIEA QFQDVYTHQK FREVQAQFRG KANCITRLTN  240
FALGYLVYKV GEQVSSSIFN KFVVTYDSVA AEVKCQYLLF ESRGILCRHA LSVLSFEQSK  300
KVKRRHTHIK SSHDEPLLEP RSKRFDQLVF CSQNICEFAS ELEELTAILH RAYDNVMAEM  360
KSLKAKRKGT SSLSHEDANL ESVNELQSPP RIRTRGRPKN RLSSKLDSQY QGHVMNYQFR  420
VPAAGDNSLG V
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.DY1NU
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020986710.10.0protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBLA0A445ASB60.0A0A445ASB6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.21e-20far-red elongated hypocotyls 3