PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.E23GM
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 366aa    MW: 40917.3 Da    PI: 8.1569
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.E23GMgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.97.4e-32292350259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D ++WrKYGqK++kgs++pr+YY+Cts  gCp++k+ver+ +dp+++++tYegeHnh+
  Araip.E23GM 292 SDDFSWRKYGQKPIKGSPHPRGYYKCTSVrGCPARKHVERAVDDPNMLVVTYEGEHNHT 350
                  69*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.6E-13247289IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.9E-33279350IPR003657WRKY domain
PROSITE profilePS5081131.158286352IPR003657WRKY domain
SuperFamilySSF1182902.35E-27287351IPR003657WRKY domain
SMARTSM007747.6E-39291351IPR003657WRKY domain
PfamPF031065.0E-27293349IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MAVEFISGYD CGGDGDHSFV SNNDATTAAA VGEAACGGIE SVEKLMDMIS EQKHEENDDY  60
SSLEKEEFAG VAVSILDNNK PRTRLLGHAR FRRAPSSTTL LPNNLQLQQM DHEKETINAT  120
RFFELSKEKD GFSPQQRSKE EQVSSSAFKL YCPISILPPL PQRKRNNNYH DYPSRFSHNQ  180
KNNNVEANNG SSTSIDFSTT NSCTYLSTLT NNIDDDHGFQ IQRVSLNKGS SSSYMQKPPL  240
SNSSLNKRKC NSLDNNVQSS SSKCHCYKKR KSKLKRVIRV AAISSKTADI PSDDFSWRKY  300
GQKPIKGSPH PRGYYKCTSV RGCPARKHVE RAVDDPNMLV VTYEGEHNHT LTHDDYANDA  360
VILQSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-212883511476Probable WRKY transcription factor 4
2lex_A2e-212883511476Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.E23GM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025606919.10.0probable WRKY transcription factor 7
RefseqXP_025660320.10.0probable WRKY transcription factor 7
TrEMBLA0A445CY010.0A0A445CY01_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3000022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.17e-70WRKY DNA-binding protein 7