PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.E29R3
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 242aa    MW: 26862 Da    PI: 7.9906
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.E29R3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.83.1e-09125163143
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAa 43 
                  s+y+GV+ +k  grW+A    +     +k+++lg f+t+ eAa
  Araip.E29R3 125 SKYRGVTLHK-CGRWEACMGQF--L-GKKYVYLGLFDTEIEAA 163
                  89********.7******5553..2.26**********99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.11001.2E-8131No hitNo description
SuperFamilySSF536861.58E-5235IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzyme
CDDcd000181.76E-12125163No hitNo description
SuperFamilySSF541711.5E-8125163IPR016177DNA-binding domain
PfamPF008472.4E-5125163IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.8E-5126163IPR001471AP2/ERF domain
SMARTSM003802.2E-5126172IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MLVCGIGTGG TITGAGKYLK EKNSNIKCTS ASSIEVRSRA ALVITAESLA LTLQASCNLK  60
DSKELFERCL NAQKVLLPDD HIQVDLTPHM QLLVAIKFRG VEADINFNIE DYEEDLNTGF  120
PRGSSKYRGV TLHKCGRWEA CMGQFLGKKY VYLGLFDTEI EAASFSLQRN MQRSSSVSRA  180
FGEFFIDLST TASVRLPKES ITDLINGKSN YKSQGEKAIH LIPFVLFLCA FILWIFSHPC  240
TL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.E29R3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.28e-37AP2 family protein