PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.E2JUR
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 383aa    MW: 44764.2 Da    PI: 8.1273
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.E2JURgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.21.8e-2069160191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fYn+YA   GF +rk+   +  ++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C a+lkvk ++  g+ +v+ +++ HnH+l+p
  Araip.E2JUR  69 QFYNAYACWHGFVMRKDDVVRA-KEGKIICRKLVCNKEGWRNMRYIDlDNRSREARSLTRTKCPARLKVKVDYgCGRLKVSCFVESHNHDLTP 160
                  6*****************9998.6677***************999887889999*******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.2E-1869160IPR004330FAR1 DNA binding domain
PROSITE profilePS509669.854309345IPR007527Zinc finger, SWIM-type
SMARTSM005750.0027320347IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MSTNKHDVKN DSDDDLGDDF DYELTPQDDV DSLNFTSKSE QDCGVKRITN LMVEDIWNLE  60
FRTEDDACQF YNAYACWHGF VMRKDDVVRA KEGKIICRKL VCNKEGWRNM RYIDLDNRSR  120
EARSLTRTKC PARLKVKVDY GCGRLKVSCF VESHNHDLTP PQFAHLVPAN CRLTVTDKVQ  180
VKNLHNFGVK TCHIMGYIAF QKGINSLIRF YVNRKNTLID FMHNLDRALK EYRNNELIAD  240
FKCWCSEPVM ITSLEVYERF ASCYFTRNIF KEIRNEIQRA GTLNIKVLST NLDKVEFSVT  300
ALGDPAKDRR VEVDRSKNLF SCSCKLLESR GIPCSHIFYA MKFKNLLEFP ESLIYKRWTK  360
NAKNEFISTE MLVNDDVERV LKF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.E2JUR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016199886.11e-177protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YAV20.0A0A444YAV2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-18FAR1-related sequence 5