PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.E32FH
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 87aa    MW: 9969.1 Da    PI: 5.1365
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.E32FHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.81.5e-075187240
         FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40
                  Y++YAk vGFs+r+++++++   +ei+++  +Cs+e k
  Araip.E32FH 51 VYRNYAKAVGFSTRVRSTNRK--GNEIKNQLITCSRERK 87
                 7***************98887..8889*********975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.8E-55186IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    Send to blast
MDDSTSDCQL NQGEVDYEFE SNIVPEPLSV DDQFVPKVRM TFTTLEDAGK VYRNYAKAVG  60
FSTRVRSTNR KGNEIKNQLI TCSRERK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.E32FH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-64HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020989500.16e-45uncharacterized protein LOC110276745
TrEMBLA0A444YPX91e-50A0A444YPX9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477