PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.E3A8Q

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 115aa MW: 13490.8 Da PI: 10.5672

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.E3A8Q	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	41.2	5.3e-13	9	81	17	91
FAR1 17 skskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 ++++++++ ++i+++ vCs+eg+ +++ + + +t+++ r +C a++ ++ +k g w ++k++l+H+H+++p Araip.E3A8Q 9 ARKNTTRDGDKIKNQLIVCSREGRWKSKISL---TLKTNPSARLNCPARIYIHIMKdVGLWTISKVVLNHSHPCFP 81 34445567778888889*****9999877...999**************999************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.5E-10	4	80	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 115 aa Download sequence Send to blast
MIFKTLEEAR KNTTRDGDKI KNQLIVCSRE GRWKSKISLT LKTNPSARLN CPARIYIHIM 60 KDVGLWTISK VVLNHSHPCF PDQAEMLKQH RELSMFVRRT IETHEEAKIR PSKTY

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.E3A8Q

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016206076.1	2e-65	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YKU5	7e-65	A0A444YKU5_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-07	FAR1-related sequence 5