PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ERC12
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 173aa    MW: 19028.1 Da    PI: 7.351
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ERC12genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-101457855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 +Er+RR ++N  f++L+  +P +      K +K  i +++++YIk+L+
  Araip.ERC12 14 AERNRRLKMNRLFSQLQATIPRP----LSKATKEVIITETIRYIKELE 57
                 6*********************6....59****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.811656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-51262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.92E-71459No hitNo description
SuperFamilySSF474591.31E-111478IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-121471IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-81457IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MKGDSECGGS SMPAERNRRL KMNRLFSQLQ ATIPRPLSKA TKEVIITETI RYIKELERKK  60
NNLEQIKELQ IQSHASGTTF MLPCMANDDN CSVTVTVSAN VAFFGIQTVA RRGLITMILE  120
VFSNHKAEIL AANVAVNEGI LTFAVTALLQ IVADGEGEGE GAVEMIKREI MTL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ERC12
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177710.11e-125transcription factor UDT1-like
RefseqXP_025628796.11e-125transcription factor UDT1-like
TrEMBLA0A445AWZ31e-123A0A445AWZ3_ARAHY; Uncharacterized protein
STRINGXP_007154231.12e-47(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF143301314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.22e-06bHLH family protein