PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ERZ5M
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 432aa    MW: 48007.2 Da    PI: 7.1329
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ERZ5MgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.31.3e-164794148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed +lvd+v+++G g+W+++ r   + R++k+c++rw ++l
      Araip.ERZ5M 47 KGPWTAAEDAILVDYVTKHGEGNWNAVQRNTKLARCGKSCRLRWANHL 94
                     79******************************************9986 PP
2Myb_DNA-binding52.41.2e-16100143146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g++++eE++l++++++q+G++ W++ a+ ++ gRt++++k++w++
      Araip.ERZ5M 100 KGAFSPEEEKLIIELHAQFGNK-WARMAALLP-GRTDNEIKNYWNT 143
                      799*******************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.7934294IPR017930Myb domain
SuperFamilySSF466891.12E-2945141IPR009057Homeodomain-like
SMARTSM007173.4E-124696IPR001005SANT/Myb domain
PfamPF002498.4E-144794IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.0E-2348101IPR009057Homeodomain-like
CDDcd001672.55E-104994No hitNo description
PROSITE profilePS5129424.85495149IPR017930Myb domain
SMARTSM007172.7E-1699147IPR001005SANT/Myb domain
PfamPF002491.4E-15100143IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.4E-25102148IPR009057Homeodomain-like
CDDcd001674.14E-12102143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MMENINKDAE NDANSFTAMR GSMEAGDGCC GDSGGATAAG DEVALKKGPW TAAEDAILVD  60
YVTKHGEGNW NAVQRNTKLA RCGKSCRLRW ANHLRPNLKK GAFSPEEEKL IIELHAQFGN  120
KWARMAALLP GRTDNEIKNY WNTRVKRRQR QGLPLYSDDP DRPTISSTPT TPITHLGTNF  180
MNNSPTSKFE FLHHQSYLHS PSPHHHHLNH SPLTSPLHRA PSYSPHTFLD ATTHSPLSSS  240
SLHSPLSTPI SSSPLSFTFH RPAPLLCNPL RFKRYRSTST VNPTTPTTPT HLSDLDNGFR  300
FPVHLNSSSS FSHFFQNPSL LDPERNMVCS TSPSSFLSKI ELPSNQFSLS SQPHQIEPSE  360
FKLDDVEYNN DPNCLNTSNG LVGDILSEAQ TMASSHQNLK KRSYFGLNEG HDEVFEGCQS  420
FDDSLYWSSS SG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-31451485107B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ERZ5M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016205949.20.0transcription factor MYB101-like
TrEMBLA0A445AP480.0A0A445AP48_ARAHY; Uncharacterized protein
STRINGAES703761e-130(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06100.13e-66myb domain protein 33