PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.ES9W6

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 206aa MW: 24313.4 Da PI: 10.3818

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.ES9W6	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.8	4.3e-19	30	115	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY++YAk+vGF ++++ +++ r++ +++ +C++e +r+++ + ++t+++t+ +C a++ ++++k+g w+++k+ l+H+H++ Araip.ES9W6 30 QFYQNYAKRVGFVTKIRFTRRVGRDKVPKNQMITCNREETRKSRVSP---IEKTNPKTNYNCPARISIRLNKEGLWVISKVCLDHSHPC 115 6**************************************999877...999********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.8E-16	30	116	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence Send to blast
MISILTHCIL YVSKFKKIGM CFGTLNDANQ FYQNYAKRVG FVTKIRFTRR VGRDKVPKNQ 60 MITCNREETR KSRVSPIEKT NPKTNYNCPA RISIRLNKEG LWVISKVCLD HSHPCNSEMA 120 KLLTCNREMS MHMCEVIKRN DGADQAKHIK CWWVKRGIFM KKDIDGFQFF YHSFWAGMRS 180 TQRSESMHSY FDKFLNNKSL LIEFVK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.ES9W6

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016185233.1	6e-78	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_025635652.1	6e-78	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444ZKE0	6e-87	A0A444ZKE0_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	6e-13	FAR1 family protein