PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.F1ZX1
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 425aa    MW: 47249.1 Da    PI: 8.1466
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.F1ZX1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.58.9e-31158217159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg++WrKYGqK  kg+++prsYYrCt + +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  Araip.F1ZX1 158 MNDGCQWRKYGQKIAKGNPCPRSYYRCTVSsSCPVRKQVQRCAQDMSILITTYEGTHNHP 217
                  58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-32143219IPR003657WRKY domain
SuperFamilySSF1182901.57E-27151219IPR003657WRKY domain
PROSITE profilePS5081129.218153219IPR003657WRKY domain
SMARTSM007745.5E-36158218IPR003657WRKY domain
PfamPF031062.6E-27159217IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
SCPDHHFNIL ESNGDNNEEI GGNKDPKIES TTEGGMGKLE VLLRNGANDE DSSSLVQKEY  60
LFDIILQQQK QEATTKEGIN NNNEDSDEEL VSLSLGVSSS ASNNREEKLL TEMWPPSKVL  120
KTTKNNGEGN EASHHHHHNT RLKKTRVSIR ARCDTQTMND GCQWRKYGQK IAKGNPCPRS  180
YYRCTVSSSC PVRKQVQRCA QDMSILITTY EGTHNHPLPS SATPMASATS AAASVLQSSS  240
LSSSSSQQGL VPNSETTTII NPNNNTTLIR PQQFYLFNSS MISNNNFHPT ITLDLITKPP  300
TSSSSSIPKY SPTNLDFSST TTTFSPLQYS TQDSSSSRYY WNLNNNKNGK QPLIQYHQGN  360
YYPYQQNCMP IIFQQPLHAD CYASSALNNN QQGNITFSLL TSQPSKGSYA SPPSKKSYQF  420
LEKRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-21145219174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.F1ZX1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016193041.10.0probable WRKY transcription factor 61
RefseqXP_025641211.10.0probable WRKY transcription factor 61
TrEMBLA0A445DP260.0A0A445DP26_ARAHY; Uncharacterized protein
STRINGGLYMA01G05050.12e-85(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-45WRKY DNA-binding protein 72