PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.F3QBW
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 393aa    MW: 43073.9 Da    PI: 4.9534
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.F3QBWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18133182255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  Araip.F3QBW 133 QFRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFSTAEEAARAYDAEARRIRG 182
                  69*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.93E-32133191No hitNo description
PROSITE profilePS5103223.696133190IPR001471AP2/ERF domain
SMARTSM003806.7E-38133196IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.1E-32133191IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-21133191IPR016177DNA-binding domain
PfamPF008475.6E-11134182IPR001471AP2/ERF domain
PRINTSPR003674.4E-11134145IPR001471AP2/ERF domain
PRINTSPR003674.4E-11156172IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    Send to blast
MCGGAIISDF IPGGSAAAAS RSRRVTADIL WPNLRKPVSK SGKRRGGAGA GVVAVDDDFE  60
ADFREFKDDS DIDEDEDYDV DDVVGGGSVK GFGSFGSTKT AKPQLKARGP AAVKSMEPSG  120
EVEKSAKRKR KNQFRGIRQR PWGKWAAEIR DPRKGVRVWL GTFSTAEEAA RAYDAEARRI  180
RGKKAKVNFP EEVPAASSKR FKPHPEMQLP KEKMNCAKPK LNNQMFDFGN ELGDLYSHLD  240
QVEQKPLINQ YANMESFPGN GLLNASDDVA AYFTSEHSSN SFEYSDLSWG EQGPKTPEIS  300
SMLSAPVEVQ GAAKQEKNMV QPNNTQADSV KTLSEELADM ESQLKFFDTP YLDASWNDTS  360
LESFLGVDST QDVGNPMNLW SFDDLPSVGG GVF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-201331971479Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.F3QBW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5372202e-63AF537220.1 Glycine max ethylene responsive protein (EREB) mRNA, complete cds.
GenBankBT0968142e-63BT096814.1 Soybean clone JCVI-FLGm-25F24 unknown mRNA.
GenBankJN4166022e-63JN416602.1 Glycine max cultivar Jilin 32 ethylene-responsive transcription factor 7 (ERF7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016182716.10.0ethylene-responsive transcription factor RAP2-12
RefseqXP_025631965.10.0ethylene-responsive transcription factor RAP2-12-like
TrEMBLA0A445ADB80.0A0A445ADB8_ARAHY; Uncharacterized protein
STRINGXP_007135380.11e-159(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48083252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.31e-49related to AP2 2