PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.F678S
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 180aa    MW: 20670.9 Da    PI: 6.3934
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.F678SgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.63.9e-11149170122
                  ---SS-EEEEEEE--TT-SS-E CS
         WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                  ldDgy+WrKYGqK vk+s +pr
  Araip.F678S 149 LDDGYRWRKYGQKAVKNSMYPR 170
                  59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-12134171IPR003657WRKY domain
SuperFamilySSF1182904.18E-9143171IPR003657WRKY domain
PROSITE profilePS5081112.358144170IPR003657WRKY domain
SMARTSM007741.8E-4149180IPR003657WRKY domain
PfamPF031062.8E-7150171IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MENQDPSPPQ LLLPPPQQDH HHSHNDNNIH DESQYNPLFF LPPPPSPSSS IMMMQNPLVQ  60
ENIDWVSFLS NGENNNLFIG DNHNTNKETT MECASSFYAS TSTSTTSMPS LMTEVHQSGE  120
DEKKKGGRLM KKKTKPRFAF QTRSVDDILD DGYRWRKYGQ KAVKNSMYPR YTDDYSNIKI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.F678S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179808.11e-125probable WRKY transcription factor 24
RefseqXP_025635253.11e-125probable WRKY transcription factor 24
TrEMBLA0A445EIJ72e-80A0A445EIJ7_ARAHY; Uncharacterized protein
STRINGXP_007135144.13e-31(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32273471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.23e-19WRKY DNA-binding protein 43