PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.F7PFF
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 285aa    MW: 32336.7 Da    PI: 6.0167
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.F7PFFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR178.71.1e-2459148290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  fYn+Y++  GF +r+ k+  + + gei+++tfvC+++g+r+++  + ++++r+++++t++gC a++++k+++ +gkw+v+++  +HnHel+
  Araip.F7PFF  59 FYNSYSRLKGFATRQGKKVPN-KVGEIVRYTFVCNRQGFRDKKWLEmADRKREHKVVTHCGCLAEMRIKRKDgSGKWYVSRFLDNHNHELV 148
                  9***************99988.7777***************99877678899999**********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.1E-2259148IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MGFEEQEGVY DTRIEAEETV AECEGKADPI FHELNGVEGL QVEDILQMEF CTPEEARCFY  60
NSYSRLKGFA TRQGKKVPNK VGEIVRYTFV CNRQGFRDKK WLEMADRKRE HKVVTHCGCL  120
AEMRIKRKDG SGKWYVSRFL DNHNHELVAG KYVDYLRSHR GLSDVEIAHL TSLREVDIGK  180
LLGDVFELRF ATAMLVIAEK CTSFKNIEGP SKPGSCFGRV ACLSDDDFKD YSKKILSDAL  240
RLEMKHGLRT AEETVVSVSD VGMKDPIHAE QSHPEGEDAA PLSQF
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.F7PFF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177630.11e-123protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025680525.11e-124protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445BA312e-93A0A445BA31_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-20FAR1-related sequence 5