PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.G2X2P
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 467aa    MW: 52923.8 Da    PI: 10.3346
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.G2X2PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.52.1e-17193277195
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                  f+k +++s+v +  +l lp +f+++h  k+ +   ++lede+g+++e  +i ++++    l++GW++F+ +++L++gD +vF+l+++++f    k
  Araip.G2X2P 193 FIKSMVRSHVYSCFWLGLPLRFCAKHLPKTVC--NMILEDETGKEFEAVFIGNRSG----LSGGWRGFALEHKLDDGDALVFELTEKTRF----K 277
                  89************************666667..6***************555554....9**********************9875555....3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.2E-19185282IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.28E-21186281IPR015300DNA-binding pseudobarrel domain
CDDcd100173.21E-22191279No hitNo description
PROSITE profilePS5086311.674193284IPR003340B3 DNA binding domain
PfamPF023622.7E-15193277IPR003340B3 DNA binding domain
SMARTSM010195.2E-19193287IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
KFPPFTGGWQ SCFIQTALHL FLDLKSRRLD AALYSSLQAK ANASSFSSLS PYHQQMAKGC  60
TNNDYEEARK QRLEENKKRF EDLGISTISK NLSEIASSVK KSPYRSPKPK SKRDVVVEPR  120
RSSRVRNPVR TYREDGDIEL PTFRKRSRSS SSWGSYIARP LDEIKEATVE QRARALEAAE  180
KLQSNLQSEN PSFIKSMVRS HVYSCFWLGL PLRFCAKHLP KTVCNMILED ETGKEFEAVF  240
IGNRSGLSGG WRGFALEHKL DDGDALVFEL TEKTRFKIYR IKAFPDSAEE YEKQILKEEG  300
NKRAKKALKA NSNSESEFDK TKNPKKAIAD KTNEVESSKD NLPERNIDTE VKPQEVKLSY  360
RTRFTRKKVQ DKSKGGTQVE NGESKEAMKP KSQGNKTKKS KESVDHKIDN SDNTQQVLSK  420
NNPVGPKGAS LSNEDGIVQD GGPVEENSKS VSKPRKMRAP KLFRKRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.G2X2P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016166586.10.0B3 domain-containing protein Os05g0481400 isoform X1
RefseqXP_025666574.10.0B3 domain-containing protein Os05g0481400
TrEMBLA0A444YBU70.0A0A444YBU7_ARAHY; Uncharacterized protein
STRINGGLYMA02G40400.31e-146(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF124332328
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.11e-52B3 family protein