PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.G6M9W

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 192aa MW: 22147.3 Da PI: 8.5921

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.G6M9W	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.6	1e-18	59	145	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++YAk +GFs+r+++++++ ++i+++ +Cs+egk +++ + +++t+ + +C a++ ++ k g w ++k++l+H+H+++p Araip.G6M9W 59 KFYRNYAKAAGFSTRVRSTNRK--GNKIKNQLITCSREGKWKSKISP---TEKTNLTAGLNCPARIYIHTLKnVGAWIISKVVLDHSHPCCP 145 6**************98887..777999*******998877...89999*********998879*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.7E-16	59	145	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence Send to blast
MDDSNLDCQL NQGKVNYEFE SNEVPEFLTW CILQPLSVVD DQFVPKVGMT FTTLEDAEKF 60 YRNYAKAAGF STRVRSTNRK GNKIKNQLIT CSREGKWKSK ISPTEKTNLT AGLNCPARIY 120 IHTLKNVGAW IISKVVLDHS HPCCPSKAEM LKQHRELSMS IRRTIENNEE ADRHIWVPIY 180 LDHHFWAGMR ST

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.G6M9W

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	0.0	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997362.1	1e-103	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445A850	1e-124	A0A445A850_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-11	FAR1 family protein