PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.GNN30
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 170aa    MW: 19450.4 Da    PI: 7.0065
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.GNN30genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1079.7e-341067259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  Araip.GNN30 10 EDGYRWRKYGQKAVKNSPFPRSYYRCTNNNCSVKKRVERSSEDPTIVITTYEGQHCHH 67
                 8******************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.0E-33268IPR003657WRKY domain
SuperFamilySSF1182901.12E-28367IPR003657WRKY domain
PROSITE profilePS5081129.62469IPR003657WRKY domain
SMARTSM007746.6E-39968IPR003657WRKY domain
PfamPF031061.2E-261067IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MTKSETDHLE DGYRWRKYGQ KAVKNSPFPR SYYRCTNNNC SVKKRVERSS EDPTIVITTY  60
EGQHCHHSVG TFHHHRQLSG MLSSNQKSTF ATQFSLGNMS HFYYPIDQLP EENTLISSSV  120
SDDPYCQSHN NDNYNGRRSI TLADSSTPEE LPTDDGLLGD ILLPRQMRNG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A9e-272661074Probable WRKY transcription factor 4
2lex_A9e-272661074Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.GNN30
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016190896.11e-126probable WRKY transcription factor 57
RefseqXP_025639140.11e-126probable WRKY transcription factor 57
TrEMBLA0A445DNQ41e-125A0A445DNQ4_ARAHY; Uncharacterized protein
STRINGXP_007157586.11e-55(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108143140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-44WRKY DNA-binding protein 57