PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.GX4JH
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 296aa    MW: 33733.9 Da    PI: 8.6728
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.GX4JHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.76.6e-25140200259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D  +WrKYGqK++ +s+fprsYYrCt +   gC+++k+v+r +++p + +itY g+H+++
  Araip.GX4JH 140 EDNLAWRKYGQKDILNSKFPRSYYRCTRKydqGCKATKQVQRIQDNPVLYQITYIGRHTCK 200
                  7999***********************998899**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081119.29134197IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.4E-24135200IPR003657WRKY domain
SuperFamilySSF1182901.26E-23137200IPR003657WRKY domain
SMARTSM007741.7E-34139201IPR003657WRKY domain
PfamPF031065.5E-24140200IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MSSIVICGSE GNIGFSEKRE RLMNKLVEGH KHATELKLLL QNQNQNPPAT IHHGGGSSAE  60
ALLITKILRS FAETLSLVIA ANSTNNDLRS EEGSSESSKR FSSSVPKDRR GTYKRSLGFR  120
TELMRRKTEE TWSNVSPTTE DNLAWRKYGQ KDILNSKFPR SYYRCTRKYD QGCKATKQVQ  180
RIQDNPVLYQ ITYIGRHTCK ETLKAPQMTA YLLNPQDHHQ TPPTNAIIKQ EYPKQEDTPS  240
GEIIIAEKLD ANLWSELKDI EITNPPTYAN FSAFSYHFCT TGFHFDDHHH GESHML
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-22133200269OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.GX4JH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179175.10.0probable WRKY transcription factor 70
RefseqXP_025684398.10.0WRKY DNA-binding transcription factor 70
TrEMBLA0A444X4N10.0A0A444X4N1_ARAHY; Uncharacterized protein
STRINGGLYMA04G40130.13e-69(Glycine max)
STRINGXP_007136415.12e-69(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-35WRKY DNA-binding protein 70